Reviewed,
UniProtKB/Swiss-Prot Q09165 (DIG1_CAEEL)
Last modified
November 25, 2008.
Version 64.
History...
Clusters with 100%,
90%,
50% identity |
Documents (4) |
Third-party data |
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Names and origin
| Protein names | Recommended name: Mesocentin | ||||
| Gene names |
| ||||
| Organism | Caenorhabditis elegans [Complete proteome] | ||||
| Taxonomic identifier | 6239 [NCBI] | ||||
| Taxonomic lineage | Eukaryota › Metazoa › Nematoda › Chromadorea › Rhabditida › Rhabditoidea › Rhabditidae › Peloderinae › Caenorhabditis |
Protein attributes
| Sequence length | 13100 AA. |
| Sequence status | Complete. |
| Sequence processing | The displayed sequence is further processed into a mature form. |
| Protein existence | Evidence at protein level. |
General annotation (Comments)
| Function | Encodes an adhesion molecule involved in sensory map formation. Functions during sensory process development in the nervous system. |
| Subcellular location | |
| Sequence similarities | Contains 2 EGF-like domains. Contains 11 fibronectin type-III domains. Contains 7 Ig-like C2-type (immunoglobulin-like) domains. Contains 1 Sushi (CCP/SCR) domain. Contains 4 VWFA domains. |
Ontologies
Keywords | |
|---|---|
| Biological process | Cell adhesion |
| Cellular component | Extracellular matrix Secreted |
| Domain | EGF-like domain Immunoglobulin domain Repeat Signal Sushi |
| Molecular function | Developmental protein |
| PTM | Glycoprotein |
| Technical term | Complete proteome |
Gene Ontology (GO) | |
| Biological process | cell adhesion Inferred from electronic annotation. Source: UniProtKB-KW gonad developmentInferred from mutant phenotype. Source: WormBase hermaphrodite genitalia developmentInferred from mutant phenotype. Source: WormBase nervous system developmentInferred from mutant phenotype. Source: WormBase |
| Cellular component | proteinaceous extracellular matrix Inferred from electronic annotation. Source: UniProtKB-KW |
| Molecular function | calcium ion binding Inferred from electronic annotation. Source: InterPro protein bindingInferred from electronic annotation. Source: UniProtKB-KW |
| Complete GO annotation... | |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||||||
Molecule processing | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Signal peptide | 1 – 24 | 24 | Potential | ||||||||
| Chain | 25 – 13100 | 13076 | Mesocentin | PRO_0000233334 | |||||||
Regions | |||||||||||
| Domain | 162 – 222 | 61 | Sushi | ||||||||
| Domain | 225 – 263 | 39 | EGF-like 1 | ||||||||
| Domain | 305 – 392 | 88 | Ig-like C2-type 1 | ||||||||
| Domain | 394 – 488 | 95 | Fibronectin type-III 1 | ||||||||
| Domain | 491 – 577 | 87 | Ig-like C2-type 2 | ||||||||
| Domain | 581 – 674 | 94 | Fibronectin type-III 2 | ||||||||
| Domain | 681 – 778 | 98 | Ig-like C2-type 3 | ||||||||
| Domain | 782 – 875 | 94 | Fibronectin type-III 3 | ||||||||
| Domain | 892 – 983 | 92 | Ig-like C2-type 4 | ||||||||
| Domain | 991 – 1091 | 101 | Fibronectin type-III 4 | ||||||||
| Domain | 1094 – 1194 | 101 | Fibronectin type-III 5 | ||||||||
| Domain | 1203 – 1280 | 78 | Ig-like C2-type 5 | ||||||||
| Domain | 1284 – 1381 | 98 | Fibronectin type-III 6 | ||||||||
| Domain | 1386 – 1490 | 105 | Fibronectin type-III 7 | ||||||||
| Domain | 1500 – 1576 | 77 | Ig-like C2-type 6 | ||||||||
| Domain | 1582 – 1694 | 113 | Fibronectin type-III 8 | ||||||||
| Domain | 1699 – 1803 | 105 | Fibronectin type-III 9 | ||||||||
| Domain | 1810 – 1904 | 95 | Ig-like C2-type 7 | ||||||||
| Domain | 2005 – 2097 | 93 | Fibronectin type-III 10 | ||||||||
| Domain | 6599 – 6787 | 189 | VWFA 1 | ||||||||
| Domain | 12167 – 12341 | 175 | VWFA 2 | ||||||||
| Domain | 12379 – 12557 | 179 | VWFA 3 | ||||||||
| Domain | 12609 – 12780 | 172 | VWFA 4 | ||||||||
| Domain | 12817 – 12905 | 89 | Fibronectin type-III 11 | ||||||||
| Domain | 12988 – 13029 | 42 | EGF-like 2; calcium-binding Potential | ||||||||
| Compositional bias | 6894 – 6898 | 5 | Poly-Glu | ||||||||
| Compositional bias | 7613 – 7617 | 5 | Poly-Glu | ||||||||
| Compositional bias | 8387 – 8391 | 5 | Poly-Glu | ||||||||
| Compositional bias | 9431 – 9435 | 5 | Poly-Glu | ||||||||
| Compositional bias | 10150 – 10154 | 5 | Poly-Glu | ||||||||
Amino acid modifications | |||||||||||
| Glycosylation | 70 | 1 | N-linked (GlcNAc...) Potential | ||||||||
| Glycosylation | 178 | 1 | N-linked (GlcNAc...) Potential | ||||||||
| Glycosylation | 324 | 1 | N-linked (GlcNAc...) | ||||||||
| Glycosylation | 384 | 1 | N-linked (GlcNAc...) | ||||||||
| Glycosylation | 518 | 1 | N-linked (GlcNAc...) | ||||||||
| Glycosylation | 575 | 1 | N-linked (GlcNAc...) | ||||||||
| Glycosylation | 841 | 1 | N-linked (GlcNAc...) | ||||||||
| Glycosylation | 931 | 1 | N-linked (GlcNAc...) Potential | ||||||||
| Glycosylation | 1112 | 1 | N-linked (GlcNAc...) Potential | ||||||||
| Glycosylation | 1211 | 1 | N-linked (GlcNAc...) Potential | ||||||||
| Glycosylation | 1399 | 1 | N-linked (GlcNAc...) Potential | ||||||||
| Glycosylation | 1612 | 1 | N-linked (GlcNAc...) Potential | ||||||||
| Glycosylation | 1840 | 1 | N-linked (GlcNAc...) Potential | ||||||||
| Glycosylation | 1879 | 1 | N-linked (GlcNAc...) Potential | ||||||||
| Glycosylation | 1898 | 1 | N-linked (GlcNAc...) Potential | ||||||||
| Glycosylation | 8810 | 1 | N-linked (GlcNAc...) Potential | ||||||||
| Glycosylation | 10555 | 1 | N-linked (GlcNAc...) Potential | ||||||||
| Glycosylation | 10570 | 1 | N-linked (GlcNAc...) Potential | ||||||||
| Glycosylation | 12294 | 1 | N-linked (GlcNAc...) | ||||||||
| Glycosylation | 12478 | 1 | N-linked (GlcNAc...) | ||||||||
| Glycosylation | 12840 | 1 | N-linked (GlcNAc...) Potential | ||||||||
| Glycosylation | 12843 | 1 | N-linked (GlcNAc...) | ||||||||
| Glycosylation | 12895 | 1 | N-linked (GlcNAc...) Potential | ||||||||
| Glycosylation | 12913 | 1 | N-linked (GlcNAc...) Potential | ||||||||
| Disulfide bond | 193 ↔ 220 | By similarity | |||||||||
| Disulfide bond | 327 ↔ 374 | By similarity | |||||||||
| Disulfide bond | 517 ↔ 561 | By similarity | |||||||||
| Disulfide bond | 705 ↔ 762 | By similarity | |||||||||
| Disulfide bond | 1226 ↔ 1264 | By similarity | |||||||||
| Disulfide bond | 1523 ↔ 1562 | By similarity | |||||||||
| Disulfide bond | 1839 ↔ 1888 | By similarity | |||||||||
Sequences
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Clusters with